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transcription factor binding software

Find and compare the best bioinformatics software for identifying transcrip...

📦 .zip⚖️ 109.2 MB📅 25 Jan 2026

Find and compare the best bioinformatics software for identifying transcription factor DNA binding sites. Tools are ranked by the biomedical research community.

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Excluding up to 95% false positive transcription factor binding sites weigh...

📦 .zip⚖️ 41.5 MB📅 19 Jul 2026

Excluding up to 95% false positive transcription factor binding sites weight matrix-based program for predicting transcription factor binding sites (TFBS) in DNA.

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Which is the best online software for predicting transcription factor bindi...

📦 .zip⚖️ 73.7 MB📅 25 Mar 2026

Which is the best online software for predicting transcription factor binding site on given For transcription factor binding site prediction you can use these tools.

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PROMO is a program to predict transcription factor binding sites in DNA seq...

📦 .zip⚖️ 94.7 MB📅 30 Jun 2026

PROMO is a program to predict transcription factor binding sites in DNA sequences. It can analyse one sequence or multiple related sequences.

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The source code for much of the newer Wasserman Lab software is available a...

📦 .zip⚖️ 90.1 MB📅 12 Jul 2026

The source code for much of the newer Wasserman Lab software is available at Bioconductor data package for JASPAR, Transcription factor binding profile.

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TFBIND: Software for searching transcription factor binding sites (includin...

📦 .zip⚖️ 62.3 MB📅 18 Mar 2026

TFBIND: Software for searching transcription factor binding sites (including TATA boxes, GC boxes, CCAAT boxes, transcription start sites (TSS)). This tool uses.

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The ChIP-Seq tools are used to analyze ChIP-seq data and other types of mas...

📦 .zip⚖️ 49.1 MB📅 21 Nov 2025

The ChIP-Seq tools are used to analyze ChIP-seq data and other types of mass genome annotation data (MGA).The programs are: a feature.

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Promoter and Transcription Factors Databases; Phylogenetic Footprinting Sit...

📦 .zip⚖️ 79.9 MB📅 19 Jan 2026

Promoter and Transcription Factors Databases; Phylogenetic Footprinting Sites; open in new windowJaspar - The high-quality transcription factor binding open in new windowPRIMA - a software for promoter analysis from.

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Introduction. MatInspector is a software tool that utilizes a large library...

📦 .zip⚖️ 19.3 MB📅 27 Dec 2025

Introduction. MatInspector is a software tool that utilizes a large library of matrix descriptions for transcription factor binding sites to locate matches in DNA.

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You can use Genome Compiler - they have embedded into their software the RB...

📦 .zip⚖️ 44.2 MB📅 14 Dec 2025

You can use Genome Compiler - they have embedded into their software the RBS Calculator by Prof. Howard Salis. Here are some helpful.

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There are several similar software tools available on the web that use weig...

📦 .zip⚖️ 81.7 MB📅 24 Nov 2025

There are several similar software tools available on the web that use weight matrices for predicting TF binding sites. SIGNAL SCAN (2), MATRIX SEARCH (3).

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This Web site predicts transcription factor binding sites (TFBS) in DNA seq...

📦 .zip⚖️ 86.9 MB📅 08 Jul 2026

This Web site predicts transcription factor binding sites (TFBS) in DNA sequence using Analysis, DNA/methods*; Software*; Transcription Factors/genetics*.

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What resources can I use to identify potential transcription factor binding...

📦 .zip⚖️ 73.3 MB📅 24 Feb 2026

What resources can I use to identify potential transcription factor binding sites in my DNA If not at NCBI, where can a user find restriction map software?

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The high-quality transcription factor binding profile database published co...

📦 .zip⚖️ 37.4 MB📅 29 Oct 2025

The high-quality transcription factor binding profile database published collections of experimentally defined transcription factor binding sites for eukaryotes.

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Match is a weight matrix-based program for predicting transcription factor ...

📦 .zip⚖️ 96.1 MB📅 18 Dec 2025

Match is a weight matrix-based program for predicting transcription factor binding sites (TFBS) in DNA sequences. It uses a library of positional weight matrices.

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